Co-expression analysis

Gene ID	1621461_at
Gene name	hypothetical protein LOC100262678
Homology with Arabidopsis	Similar to At5g39850: 40S ribosomal protein S9 (RPS9C) (HF=1e+0)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1621461_at	CB918305	hypothetical protein LOC100262678	-	1e+0	At5g39850	40S ribosomal protein S9 (RPS9C)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1619242_at	CB979954	-	-	4e-12	At5g48385	-	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1614106_at	CB972413	hypothetical protein LOC100253249	-	5e-51	At3g27090	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1612718_s_at	CF201754.1	hypothetical protein LOC100262678	-	6e+0	At5g30495	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1611673_at	BQ799478	hypothetical protein LOC100267328	-	4e+0	At5g06000	EIF3G2	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1608310_at	CB346196	hypothetical protein LOC100244915	-	1e+0	At1g52480	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436421	V. riparia (VR, PI588259) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436417	V. riparia (VR, PI588259) SD, 13h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.7	84.7	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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