Co-expression analysis

Gene ID	1621431_at
Gene name	Peroxidase 4
Homology with Arabidopsis	Similar to At5g05340: peroxidase, putative (HF=6e-3)
Module size	10 genes
NF	0.16
%ile	24.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.7	0.88	1621431_at	CF205258.1	Peroxidase 4	-	6e-3	At5g05340	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.93	1617361_at	CF404356	hypothetical protein LOC100244017	-	3e-50	At4g35630	PSAT	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.91	1615694_at	BQ799849	hypothetical protein LOC100257251	-	1e+0	At5g39670	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1618716_at	CB917669	similar to Os06g0665100	-	1e-22	At5g44730	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.93	1614301_at	CB347794	hypothetical protein LOC100245067	-	2e-2	At4g23760	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.92	1610591_at	CB923320	hypothetical protein LOC100251627	-	1e-5	At2g46370	JAR1 (JASMONATE RESISTANT 1)	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.93	1621277_at	CF369061	hypothetical protein LOC100252641	-	2e-24	At1g72820	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.93	1610839_at	CB982193	hypothetical protein LOC100244263	-	1e-14	At5g27520	PNC2 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2)	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.89	1618804_at	CF605303	-	-	5e+0	At5g14370	-	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.90	1613675_at	CF519011	hypothetical protein LOC100249786	-	3e-1	At1g79760	DTA4 (DOWNSTREAM TARGET OF AGL15-4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.1	89.1	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.9	87.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
1.9	87.2	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.8	86.0	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.8	86.0	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.7	84.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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