Co-expression analysis

Gene ID 1621391_at
Gene name hypothetical protein LOC100251148
Homology with ArabidopsisSimilar to At5g47980: transferase family protein (HF=4e+0)
Module size 10 genes
NF 0.31
%ile 44.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.60.971621391_atCD801716hypothetical protein LOC100251148-4e+0At5g47980transferase family proteinO.I.H.G.S.X.
0.5779.80.981622722_atCF209124--4e-1At4g30067LCR63 (Low-molecular-weight cysteine-rich 63)O.I.H.G.S.X.
0.3548.50.981616177_atBQ800589similar to 3-methyladenine DNA glycosylase, putative; 31680-30045-2e+1At5g42630ATS (ABERRANT TESTA SHAPE)O.I.H.G.S.X.
0.3141.30.981618613_atBQ795651hypothetical protein LOC100245552-6e-7At2g35510SRO1 (SIMILAR TO RCD ONE 1)O.I.H.G.S.X.
0.2632.00.981616971_a_atCF208808hypothetical protein LOC100263708-4e-119At1g60490ATVPS34O.I.H.G.S.X.
0.2530.50.981607683_atCF207162hypothetical protein LOC100266122-2e-5At1g47710serpin, putative / serine protease inhibitor, putativeO.I.H.G.S.X.
0.2022.40.981621933_atBQ800280hypothetical protein LOC100249852-5e+0At3g17090protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.1920.90.981610676_atBQ794329hypothetical protein LOC100267604-1e+0At4g13360catalyticO.I.H.G.S.X.
0.1920.90.991619596_atCB973318hypothetical protein LOC100255105-6e-1At1g65113SCRL2 (SCR-Like 2)O.I.H.G.S.X.
0.1515.60.981619567_atBQ799671hypothetical protein LOC100245596-4e+0At5g09330anac082 (Arabidopsis NAC domain containing protein 82)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO
3.194.6GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.993.8GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147683Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation12Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.390.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.390.7GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage