Co-expression analysis

Gene ID 1621363_at
Gene name hypothetical protein LOC100250687
Homology with ArabidopsisSimilar to At1g13080: CYP71B2 (CYTOCHROME P450 71B2) (HF=5e-4)
Module size 6 genes
NF 0.01
%ile 0.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.841621363_atCA809467hypothetical protein LOC100250687-5e-4At1g13080CYP71B2 (CYTOCHROME P450 71B2)O.I.H.G.S.X.
0.5072.70.921609447_atCA811171hypothetical protein LOC100262687-2e-2At5g59305unknown proteinO.I.H.G.S.X.
0.5072.70.921606588_s_atCA811171hypothetical protein LOC100262687-2e-2At5g59305unknown proteinO.I.H.G.S.X.
0.4666.50.911611296_atBM437675hypothetical protein LOC100265112-4e-16At4g22920NYE1 (NON-YELLOWING 1)O.I.H.G.S.X.
-0.50.891608073_s_atCB968951--3e+0At2g15290TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21)O.I.H.G.S.X.
-0.50.841617130_atCF212524--7e+0At5g46350WRKY8O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.294.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.194.6GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.793.0GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.793.0GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.692.5GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.591.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.591.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.591.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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