Co-expression analysis

Gene ID 1621337_at
Gene name hypothetical protein LOC100266978
Homology with ArabidopsisSimilar to At5g10370: helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related (HF=5e-12)
Module size 19 genes
NF 0.25
%ile 35.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8895.40.891621337_atCF207223hypothetical protein LOC100266978-5e-12At5g10370helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-relatedO.I.H.G.S.X.
0.5679.40.951612551_atCF605967hypothetical protein LOC100251825-4e+0At3g19650cyclin-relatedO.I.H.G.S.X.
0.4969.30.941614366_atCD009805hypothetical protein LOC100259831-1e-31At3g55320PGP20 (P-GLYCOPROTEIN 20)O.I.H.G.S.X.
0.4464.10.951611549_atCA817419hypothetical protein LOC100243262-6e-99At1g09770ATCDC5 (ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5)O.I.H.G.S.X.
0.4057.70.951607324_atCD719348hypothetical protein LOC100244533-1e-13At3g26720glycosyl hydrolase family 38 proteinO.I.H.G.S.X.
0.3650.70.961612020_atCF372179hypothetical protein LOC100255081-6e-9At4g01000ubiquitin family proteinO.I.H.G.S.X.
0.3243.10.961611589_atCF603716hypothetical protein LOC100241492-2e-61At3g06670bindingO.I.H.G.S.X.
0.3039.40.951622755_atCF515946hypothetical protein LOC100267937-8e-1At4g22520protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2837.70.961607803_atCB975690hypothetical protein LOC100264130-7e-8At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)O.I.H.G.S.X.
0.2734.00.961607370_atCF513264hypothetical protein LOC100264871-8e-124At3g52140tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.2225.60.961613671_atCF212876hypothetical protein LOC100241076-2e-2At4g36690ATU2AF65AO.I.H.G.S.X.
0.2225.60.961620772_atCF607066hypothetical protein LOC100252015-3e-26At5g53620unknown proteinO.I.H.G.S.X.
0.2022.40.961612774_atCF210198hypothetical protein LOC100261536-2e+0At5g40900unknown proteinO.I.H.G.S.X.
0.1920.90.961609738_atCF518474similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding-1e+0At4g17565F-box family proteinO.I.H.G.S.X.
0.1920.90.941619258_atCF517798hypothetical protein LOC100255734-6e+0At5g63480unknown proteinO.I.H.G.S.X.
0.1718.20.961618240_atCF211533hypothetical protein LOC100258476-3e-13At1g01650aspartic-type endopeptidase/ peptidaseO.I.H.G.S.X.
0.1616.70.951621237_atCF603521hypothetical protein LOC100246278-3e-10At5g38640eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.
0.1212.10.961616402_a_atCF609414hypothetical protein LOC100241076-2e-15At4g36690ATU2AF65AO.I.H.G.S.X.
0.066.80.941617687_atCB981123hypothetical protein LOC100265217-4e-1At4g00310EDA8 (EMBRYO SAC DEVELOPMENT ARREST 8)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.088.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.886.0GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
1.886.0GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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