Co-expression analysis

Gene ID 1621286_at
Gene name hypothetical protein LOC100267319
Homology with ArabidopsisSimilar to At4g24760: unknown protein (HF=3e-6)
Module size 6 genes
NF 0.03
%ile 8.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.831621286_atCF213632hypothetical protein LOC100267319-3e-6At4g24760unknown proteinO.I.H.G.S.X.
0.2632.00.931609929_atCB346194hypothetical protein LOC100259947-3e+0At5g02440unknown proteinO.I.H.G.S.X.
0.045.20.951616416_atCB349840hypothetical protein LOC100251243-7e+0At3g43740leucine-rich repeat family proteinO.I.H.G.S.X.
0.034.20.951610277_atCF208016hypothetical protein LOC100257821-2e-1At1g17710phosphataseO.I.H.G.S.X.
0.034.20.951611218_atCB912267hypothetical LOC100261590-3e-1At1g66360C2 domain-containing proteinO.I.H.G.S.X.
0.012.10.941612420_atCD717999hypothetical protein LOC100252211-2e+0At1g19086unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.797.7GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.096.7GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.495.5GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
3.395.2GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
3.294.9GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os06g0678800, orthologous to the query gene, 1621286_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9299.1Os06g0678800At4g24760-Cupredoxin domain containing protein7e-5At1g41830SKS6 (SKU5-SIMILAR 6)O.I.H.G.S.X.
0.6079.7Os05g0217000At4g24760-Protein of unknown function DUF1070 family protein1e+0At2g46330AGP16 (ARABINOGALACTAN PROTEIN 16)O.I.H.G.S.X.
0.5676.3Os01g0226300At4g24760-Reticulon family protein4e-2At2g46170reticulon family protein (RTNLB5)O.I.H.G.S.X.
0.5168.7Os08g0459300At4g24760-Allergen V5/Tpx-1 related family protein6e-1At4g13270unknown proteinO.I.H.G.S.X.
0.5168.7Os06g0554300At4g24760-Hypothetical protein5e-2At1g76920F-box family protein (FBX3)O.I.H.G.S.X.
0.4863.7Os03g0286500At4g24760-RNA-binding region containing protein 1 (HSRNASEB)(ssDNA binding protein SEB4) (CLL-associated antigenKW-5). Splice isoform 28e-10At3g54770RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4558.8Os02g0175400At4g24760-Vacuolar proton-ATPase5e-89At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.3948.3Os02g0714200At4g24760-Pyrophosphate--fructose 6-phosphate1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP)(6-phosphofructokinase, pyrophosphate dependent)(Pyrophosphate-dependent 6-phosphofructose-1-kinase)(PPi-PFK)2e-48At1g76550pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putativeO.I.H.G.S.X.
0.3948.3Os11g0168100At4g24760-Syntaxin 61 (AtSYP61) (Osmotic stess-sensitivemutant 1)4e+0At4g09090glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.3846.9Os01g0925300At4g24760-Zn-finger, DHHC type domain containing protein6e-5At3g48760zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.3846.9Os03g0647800At4g24760-Conserved hypothetical protein2e-4At3g44150unknown proteinO.I.H.G.S.X.
0.3745.0Os07g0590800At4g24760-Hypothetical protein1e+0At5g61490-O.I.H.G.S.X.
0.3644.0Os05g0543100At4g24760-Clathrin adaptor complex, medium chain familyprotein3e-65At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.3644.0Os05g0533800At4g24760-Mitochondrial ATP synthase g subunit familyprotein2e-1At4g29480mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.
0.3644.0Os07g0626500At4g24760-Protein kinase domain containing protein2e-3At5g10020leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.3541.7Os07g0655400At4g24760-Conserved hypothetical protein8e-1At3g07950rhomboid protein-relatedO.I.H.G.S.X.
0.3236.3Os06g0598800At4g24760-Fatty acid elongase 1-like protein1e-28At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)O.I.H.G.S.X.
0.3134.5Os06g0196600At4g24760-3-oxoacyl-[acyl-carrier-protein] synthase I,chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACPsynthase I) (KAS I)2e-23At5g46290KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I)O.I.H.G.S.X.
0.3032.7Os02g0817500At4g24760-KCNAB voltage-gated K+ channel, beta subunitfamily protein1e-2At1g04690KAB1 (POTASSIUM CHANNEL BETA SUBUNIT)O.I.H.G.S.X.
0.2931.1Os05g0516800At4g24760-Ras-related protein RIC22e-25At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)O.I.H.G.S.X.
0.2727.5Os11g0124900At4g24760-Glycosyl transferase, family 8 protein9e-2At1g32690unknown proteinO.I.H.G.S.X.
0.2727.5Os05g0556700At4g24760-Cct2-prov protein3e-62At5g20890chaperonin, putativeO.I.H.G.S.X.
0.2727.5Os01g0588200At4g24760-Voltage-dependent anion channel6e-1At5g67500VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)O.I.H.G.S.X.
0.2727.5Os08g0327400At4g24760-Enoyl-[acyl-carrier-protein] reductase [NADH],chloroplast precursor (EC 1.3.1.9) (NADH-dependentenoyl-ACP reductase)2e-32At2g05990MOD1 (MOSAIC DEATH 1)O.I.H.G.S.X.
0.2625.6Os09g0439700At4g24760-Lung seven transmembrane receptor family protein4e-3At1g72480-O.I.H.G.S.X.
0.2625.6Os04g0619300At4g24760-Cyclin-like F-box domain containing protein3e-4At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.2422.4Os10g0477100At4g24760-Ankyrin-like protein5e-43At4g14360dehydration-responsive protein-relatedO.I.H.G.S.X.
0.2422.4Os05g0362100At4g24760-3-2-trans-enoyl-CoA isomerase (EC 5.3.3.8)9e-8At3g06860MFP2 (MULTIFUNCTIONAL PROTEIN 2)O.I.H.G.S.X.
0.2219.4Os01g0969100At4g24760-Conserved hypothetical protein9e-75At1g08200AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)O.I.H.G.S.X.
0.2219.4Os03g0117300At4g24760-Beta-glucanase family protein1e-1At2g32890RALFL17 (RALF-LIKE 17)O.I.H.G.S.X.
0.2117.9Os09g0252100At4g24760-Acetyl-CoA C-acetyltransferase2e-35At5g48230ACAT2 (ACETOACETYL-COA THIOLASE 2)O.I.H.G.S.X.
0.2016.5Os03g0713100At4g24760-Dynamin family protein2e-6At1g14830ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)O.I.H.G.S.X.
0.1510.3Os04g0412900At4g24760-Sec23/Sec24 trunk region domain containing protein2e-5At2g27460sec23/sec24 transport family proteinO.I.H.G.S.X.
0.138.2Os01g0883900At4g24760-Putative methyltransferase DUF248 family protein2e-12At5g64030dehydration-responsive protein-relatedO.I.H.G.S.X.
0.127.2Os02g0552000At4g24760-Transmembrane protein TM9SF3 (Fragment)3e-84At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.094.9Os01g0860300At4g24760-60S ribosomal protein L10a-13e-29At1g0836060S ribosomal protein L10A (RPL10aA)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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