Co-expression analysis

Gene ID	1621277_at
Gene name	hypothetical protein LOC100252641
Homology with Arabidopsis	Similar to At1g72820: mitochondrial substrate carrier family protein (HF=2e-24)
Module size	6 genes
NF	0.52
%ile	77.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.1	0.94	1621277_at	CF369061	hypothetical protein LOC100252641	-	2e-24	At1g72820	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1614388_at	CF210132	hypothetical protein LOC100241529	-	2e-1	At2g21610	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.95	1607804_at	CB004035	-	-	2e-45	At1g16270	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1615915_at	CF518741	hypothetical protein LOC100267889	-	4e+0	At2g24880	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1618259_at	BM436271	hypothetical LOC100245758	-	3e-32	At5g65780	ATBCAT-5	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.95	1615660_at	CF215672	similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase	-	1e-51	At4g27960	UBC9 (UBIQUITIN CONJUGATING ENZYME 9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	99.1	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.1	98.1	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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