Co-expression analysis

Gene ID 1621270_at
Gene name hypothetical protein LOC100252531
Homology with ArabidopsisSimilar to At5g11590: TINY2 (TINY2) (HF=4e-4)
Module size 6 genes
NF 0.52
%ile 78.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951621270_atCB971990hypothetical protein LOC100252531-4e-4At5g11590TINY2 (TINY2)O.I.H.G.S.X.
0.5779.80.951619478_atCD004753hypothetical protein LOC100247440-3e-9At5g12010unknown proteinO.I.H.G.S.X.
0.5072.70.951609113_s_atBQ800383hypothetical protein LOC100266637-3e-2At1g71780unknown proteinO.I.H.G.S.X.
0.5072.70.951606741_atCF200678.1hypothetical protein LOC100250551-5e+0At3g20155unknown proteinO.I.H.G.S.X.
0.4361.50.951615403_atCD798952hypothetical protein LOC100255828-2e-1At1g35537-O.I.H.G.S.X.
0.3039.40.951608966_atCB982651hypothetical protein LOC100256404-2e-4At5g59550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6787.90.911608812_atBM437778hypothetical protein LOC100247370-1e+0At1g54215proline-rich family proteinO.I.H.G.S.X.
0.6081.90.941612208_atCF608688hypothetical protein LOC100255828-2e-6At2g46620AAA-type ATPase family proteinO.I.H.G.S.X.
0.5779.80.941613098_atCD716212hypothetical protein LOC100264214-2e-6At4g08950EXO (EXORDIUM)O.I.H.G.S.X.
0.5375.20.881620317_atCF205562.1--8e-8At5g11070unknown proteinO.I.H.G.S.X.
0.5375.20.911621435_s_atCF515294hypothetical protein LOC100253802-2e+0At2g18040PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1)O.I.H.G.S.X.
0.5072.70.921617574_atCF403207hypothetical protein LOC100253802-4e-1At3g57770protein kinase, putativeO.I.H.G.S.X.
0.5072.70.931616947_atCD797580--9e-1At1g06515unknown proteinO.I.H.G.S.X.
0.5072.70.931609290_atCF202936.1--4e+0At5g64460-O.I.H.G.S.X.
0.5072.70.951620186_atCF511359--7e-1At5g65390AGP7O.I.H.G.S.X.
0.5072.70.971614505_s_atCB975513similar to At1g61340-2e-3At1g61340F-box family proteinO.I.H.G.S.X.
0.4666.50.921620714_atCB969540hypothetical protein LOC100259041-8e-19At4g08950EXO (EXORDIUM)O.I.H.G.S.X.
0.4464.10.951606793_atCF606029hypothetical protein LOC100255095-1e+0At1g29850double-stranded DNA-binding family proteinO.I.H.G.S.X.
0.4361.50.931617699_atCD715384hypothetical protein LOC100258773-4e-16At5g10100trehalose-6-phosphate phosphatase, putativeO.I.H.G.S.X.
0.4361.50.951620416_atCB342271hypothetical protein LOC100245041-3e-1At2g04890SCL21 (SCARECROW-LIKE 21)O.I.H.G.S.X.
0.4260.10.931606679_atCB036068hypothetical protein LOC100246740-1e-7At4g08260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.4057.70.841618150_atCF372200hypothetical LOC100261619-9e-4At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)O.I.H.G.S.X.
0.4057.70.891622294_atCA818462hypothetical protein LOC100253584-5e+0At4g01600GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.4057.70.911610553_atCA814084hypothetical protein LOC100263869-1e-7At1g64340unknown proteinO.I.H.G.S.X.
0.4057.70.921622565_atCF414998hypothetical protein LOC100264583-2e-2At1g09940HEMA2O.I.H.G.S.X.
0.3853.60.921611910_s_atAY395745.1similar to putative ethylene response factor ERF3b-9e-14At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.H.G.S.X.
0.3853.60.881609820_atCA814473--1e+0At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.3853.60.921610718_atCF605043hypothetical protein LOC100257198-3e-1At3g43432unknown proteinO.I.H.G.S.X.
0.3650.70.941621617_atBQ796921hypothetical protein LOC100259339-4e-2At4g14410basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.3548.50.941612490_atCB035871--4e+0At2g39920acid phosphatase class B family proteinO.I.H.G.S.X.
0.3446.80.921611834_atCF403331hypothetical protein LOC100247349-3e-4At2g18190AAA-type ATPase family proteinO.I.H.G.S.X.
0.3446.80.921609990_atCB009298similar to putative ethylene response factor ERF3b-1e-13At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.H.G.S.X.
0.3345.70.931621464_atCD715384--4e-16At5g10100trehalose-6-phosphate phosphatase, putativeO.I.H.G.S.X.
0.3345.70.961609190_atBQ798327hypothetical protein LOC100253381-6e+0At3g23180-O.I.H.G.S.X.
0.3243.10.921617358_s_atCB974510hypothetical protein LOC100246286 /// hypothetical LOC100254879 /// hypothetical protein LOC100258299 /// hypothetical protein LOC100258874 /// hypothetical protein LOC100264041 /// hypothetical protein LOC100265184-2e+0At2g45650AGL6 (AGAMOUS-LIKE 6)O.I.H.G.S.X.
0.3243.10.881618806_atCB003772hypothetical protein LOC100247003-1e+0At4g16820lipase class 3 family proteinO.I.H.G.S.X.
0.3141.30.951611172_atCB003645hypothetical protein LOC100261839-6e-14At4g30960SIP3 (SOS3-INTERACTING PROTEIN 3)O.I.H.G.S.X.
0.2937.70.881609636_atCD006434hypothetical protein LOC100246612-1e+0At3g57280unknown proteinO.I.H.G.S.X.
0.2937.70.941607163_atCF415171hypothetical protein LOC100243654-4e+0At5g55855unknown proteinO.I.H.G.S.X.
0.2837.70.871620003_atBQ796570hypothetical protein LOC100251303-9e-5At2g18800XTH21 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21)O.I.H.G.S.X.
0.2837.70.921609631_atCD011615hypothetical protein LOC100261215-5e+0At5g19140AILP1O.I.H.G.S.X.
0.2734.00.901620028_atCF512937hypothetical protein LOC100241085-5e-23At1g63120ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)O.I.H.G.S.X.
0.2632.00.871606571_atCD714780hypothetical protein LOC100241150-2e-2At5g42965nucleic acid binding / ribonuclease HO.I.H.G.S.X.
0.2530.50.881619573_atCD721204hypothetical protein LOC100250659-2e-3At1g27730STZ (salt tolerance zinc finger)O.I.H.G.S.X.
0.2530.50.921616198_atCF405950hypothetical protein LOC100242144-1e-7At1g28370ERF11 (ERF DOMAIN PROTEIN 11)O.I.H.G.S.X.
0.2530.50.931608050_atCF405502hypothetical protein LOC100242324-9e-5At2g01300unknown proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.798.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.294.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.194.6GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.993.8GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.993.8GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.692.5GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.692.5GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.692.5GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.692.5GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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