Co-expression analysis

Gene ID 1621270_at
Gene name hypothetical protein LOC100252531
Homology with ArabidopsisSimilar to At5g11590: TINY2 (TINY2) (HF=4e-4)
Module size 6 genes
NF 0.52
%ile 78.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951621270_atCB971990hypothetical protein LOC100252531-4e-4At5g11590TINY2 (TINY2)O.I.H.G.S.X.
0.5779.80.951619478_atCD004753hypothetical protein LOC100247440-3e-9At5g12010unknown proteinO.I.H.G.S.X.
0.5072.70.951609113_s_atBQ800383hypothetical protein LOC100266637-3e-2At1g71780unknown proteinO.I.H.G.S.X.
0.5072.70.951606741_atCF200678.1hypothetical protein LOC100250551-5e+0At3g20155unknown proteinO.I.H.G.S.X.
0.4361.50.951615403_atCD798952hypothetical protein LOC100255828-2e-1At1g35537-O.I.H.G.S.X.
0.3039.40.951608966_atCB982651hypothetical protein LOC100256404-2e-4At5g59550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.798.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.294.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.194.6GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.993.8GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.993.8GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.692.5GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.692.5GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.692.5GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.692.5GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.15675.1.A1_at, orthologous to the query gene, 1621270_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7589.8TaAffx.15675.1.A1_atAt5g11590--2e-13At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.H.G.S.X.
0.5072.4TaAffx.29351.1.S1_s_atAt5g11590--4e+0At2g25700ASK3 (ARABIDOPSIS SKP1-LIKE 3)O.I.H.G.S.X.
0.4869.0Ta.22563.1.S1_atAt5g11590--5e-2At4g24220VEP1 (VEIN PATTERNING 1)O.I.H.G.S.X.
0.4260.9Ta.3283.1.S1_atAt5g11590--2e-2At2g0125060S ribosomal protein L7 (RPL7B)O.I.H.G.S.X.
0.3956.1Ta.22563.1.S1_x_atAt5g11590--5e-2At4g24220VEP1 (VEIN PATTERNING 1)O.I.H.G.S.X.
0.3040.9Ta.1839.1.S1_atAt5g11590fasciclin-like protein FLA26-2e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.H.G.S.X.
0.3040.9Ta.1839.1.S1_x_atAt5g11590fasciclin-like protein FLA26-2e-4At2g35860FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR)O.I.H.G.S.X.
0.2939.2Ta.3219.1.S1_atAt5g11590--3e-5At5g47870unknown proteinO.I.H.G.S.X.
0.2227.1Ta.13292.1.S1_s_atAt5g11590--2e-2At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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