Co-expression analysis

Gene ID	1621260_at
Gene name
Homology with Arabidopsis	Similar to At4g30630: unknown protein (HF=3e-1)
Module size	6 genes
NF	0.34
%ile	49.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.96	1621260_at	BQ797265	-	-	3e-1	At4g30630	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1616682_at	CF512457	hypothetical protein LOC100266059	-	9e-37	At4g18030	dehydration-responsive family protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.96	1613790_at	BQ799915	hypothetical protein LOC100258406	-	4e-88	At5g47780	GAUT4 (Galacturonosyltransferase 4)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.97	1610599_at	CF211001	hypothetical protein LOC100250338	-	7e+0	At5g16790	-	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.96	1619177_at	CD720160	hypothetical protein LOC100265301	-	5e+0	At4g26030	transcription factor	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.97	1608769_at	BM437199	hypothetical protein LOC100253272	-	5e+0	At5g44306	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.4	91.3	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM147700	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation	29
2.2	89.9	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2
2.1	89.1	GSM147695	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	24
2.0	88.2	GSM147691	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	20
2.0	88.2	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7
1.9	87.2	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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