Co-expression analysis

Gene ID 1621165_at
Gene name
Homology with ArabidopsisSimilar to At2g38350: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.36
%ile 53.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.821621165_atCB979035--2e+0At2g38350unknown proteinO.I.H.G.S.X.
0.4057.70.961610939_atCF608429hypothetical protein LOC100240812-5e-9At3g05420ACBP4 (ACYL-COA BINDING PROTEIN 4)O.I.H.G.S.X.
0.4057.70.981617898_atCF605263hypothetical protein LOC100244372-3e-1At5g49610F-box family proteinO.I.H.G.S.X.
0.3345.70.981609756_atCF604406hypothetical protein LOC100263684-6e-3At1g18830transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2327.50.971609738_atCF518474similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding-1e+0At4g17565F-box family proteinO.I.H.G.S.X.
0.1718.20.98AFFX-Vvi-actin-5_atactin 1--O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436401V. riparia (VR, PI588259) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436395V. riparia (VR, PI588259) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436416V. riparia (VR, PI588259) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436405V. riparia (VR, PI588259) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
1.886.0GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.784.7GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
1.683.3GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage