Co-expression analysis

Gene ID	1621151_at
Gene name	hypothetical protein LOC100260643
Homology with Arabidopsis	Similar to At3g07260: forkhead-associated domain-containing protein / FHA domain-containing protein (HF=3e-1)
Module size	6 genes
NF	0.54
%ile	80.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	93.6	0.93	1621151_at	CB971601	hypothetical protein LOC100260643	-	3e-1	At3g07260	forkhead-associated domain-containing protein / FHA domain-containing protein	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.94	1615239_at	CF511089	-	-	4e-3	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.93	1617632_at	CF210911	hypothetical protein LOC100265855	-	4e+0	At4g09440	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.93	1614174_at	CF204824.1	-	-	1e+0	At1g23360	UbiE/COQ5 methyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.93	1611283_at	CB341968	hypothetical protein LOC100254717	-	2e-2	At4g23060	IQD22 (IQ-domain 22)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.93	1607261_at	CF517377	hypothetical protein LOC100254622	-	9e-2	At2g01755	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.5	95.7	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.2	94.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.0	94.2	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.7	93.0	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.6	92.5	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.6	92.5	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.5	91.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.4	91.3	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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