Co-expression analysis

Gene ID 1621144_at
Gene name hypothetical protein LOC100257210
Homology with ArabidopsisSimilar to At3g29636: transferase-related (HF=2e+0)
Module size 11 genes
NF 0.33
%ile 47.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.981621144_atCA816855hypothetical protein LOC100257210-2e+0At3g29636transferase-relatedO.I.H.G.S.X.
0.5375.20.981617194_atBQ794485hypothetical protein LOC100264514-5e-1At5g37520unknown proteinO.I.H.G.S.X.
0.5173.20.981612995_atCD012259--4e-18At3g13340WD-40 repeat family proteinO.I.H.G.S.X.
0.4260.10.981612817_atCB002820hypothetical protein LOC100267132-3e-1At3g62330zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.4057.70.981610845_atCF208629hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedO.I.H.G.S.X.
0.3345.70.981616840_atCF608637hypothetical protein LOC100255499-9e-15At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.
0.3039.40.981619289_atCB340785hypothetical protein LOC100242328-1e+0At4g16265NRPB9BO.I.H.G.S.X.
0.2734.00.981614869_atCF208077hypothetical protein LOC100251847-1e-12At1g50500HIT1 (HEAT-INTOLERANT 1)O.I.H.G.S.X.
0.2327.50.981608869_s_atCF514065glyceraldehyde-3-phosphate dehydrogenase-4e-41At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.2225.60.981616981_atCB971105phospholipase D alpha-4e-52At3g15730PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)O.I.H.G.S.X.
0.1920.90.981615071_atCF512279--6e-13At1g16810unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147678Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation7Link to GEO
2.088.2GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.784.7GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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