Co-expression analysis

Gene ID	1621139_at
Gene name	hypothetical protein LOC100262947
Homology with Arabidopsis	Similar to At5g08390: - (HF=3e-9)
Module size	7 genes
NF	0.60
%ile	86.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1621139_at	CB982951	hypothetical protein LOC100262947	-	3e-9	At5g08390	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1617238_at	CD800896	hypothetical protein LOC100258246	-	3e-27	At1g63430	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1615577_at	CB340193	hypothetical protein LOC100256811	-	4e-92	At5g05170	CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1611391_at	CF513307	hypothetical protein LOC100256320	-	1e-15	At1g48410	AGO1 (ARGONAUTE 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1622512_at	CF208965	hypothetical protein LOC100260682	-	4e-27	At4g38430	ROPGEF1	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1618668_at	CF513937	hypothetical protein LOC100254706	-	1e+0	At2g19760	PRF1 (PROFILIN 1)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1613856_at	CD012158	hypothetical protein LOC100264793	-	4e-89	At1g31420	FEI1 (FEI 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.7	96.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.9	93.8	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.8	93.4	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.7	93.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.6	92.5	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.6	92.5	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.6	92.5	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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