Co-expression analysis

Gene ID 1621134_at
Gene name
Homology with ArabidopsisSimilar to At5g03230: unknown protein (HF=6e-1)
Module size 6 genes
NF 0.30
%ile 43.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951621134_atCF511905--6e-1At5g03230unknown proteinO.I.H.G.S.X.
0.5072.70.981615765_x_atCF202835.1--7e-4At1g55680WD-40 repeat family proteinO.I.H.G.S.X.
0.2937.70.981621680_x_atCF202023.1--3e-1At1g76220unknown proteinO.I.H.G.S.X.
0.2734.00.981620612_s_atCF208882similar to ADP-ribosylation factor-4e-128At2g47170ARF1A1CO.I.H.G.S.X.
0.2327.50.971613937_s_atCF517439similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase-3e-1At3g25440RNA bindingO.I.H.G.S.X.
0.1313.30.971609831_atBQ794470hypothetical protein LOC100263800-3e-1At3g63230unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.793.0GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.289.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.189.1GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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