Co-expression analysis

Gene ID 1621129_at
Gene name
Homology with ArabidopsisSimilar to At2g02060: transcription factor (HF=7e-1)
Module size 48 genes
NF 0.32
%ile 46.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.941621129_atCF205522.1--7e-1At2g02060transcription factorO.I.H.G.S.X.
0.5577.30.971609950_atCF513251hypothetical protein LOC100250955-1e+0At5g46980invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.4969.30.951607703_s_atCB342217--5e-6At1g10865-O.I.H.G.S.X.
0.4767.70.971615553_atCD800674hypothetical protein LOC100261677-3e+0At2g20690lumazine-binding family proteinO.I.H.G.S.X.
0.4666.50.981619735_atCF208486hypothetical protein LOC100258926-1e-34At2g15430NRPB3O.I.H.G.S.X.
0.4361.50.961617159_atCD797901hypothetical protein LOC100242747-2e-1At2g03780translin family proteinO.I.H.G.S.X.
0.4361.50.961620048_atCB976150--4e+0At5g53730harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.4260.10.971610924_atBQ799924hypothetical protein LOC100248224-1e+0At1g35410-O.I.H.G.S.X.
0.4158.70.981611111_atCF207166hypothetical protein LOC100256502-3e-33At1g63500ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.4158.70.961609562_atCF210167hypothetical protein LOC100255509-5e-52At2g21150XCT (XAP5 CIRCADIAN TIMEKEEPER)O.I.H.G.S.X.
0.4057.70.971622110_atCD801858hypothetical protein LOC100264222-1e+0At5g66050-O.I.H.G.S.X.
0.4057.70.971617474_atCF512592hypothetical protein LOC100262558-1e-1At5g48270unknown proteinO.I.H.G.S.X.
0.4057.70.981606803_atCB981359similar to Os03g0374500-4e+0At4g01026unknown proteinO.I.H.G.S.X.
0.4057.70.971611143_atCF372549hypothetical protein LOC100266764-4e+0At1g14490DNA-binding protein-relatedO.I.H.G.S.X.
0.3954.90.981616651_atBQ796747hypothetical protein LOC100263083-1e-12At1g09270IMPA-4 (IMPORTIN ALPHA ISOFORM 4)O.I.H.G.S.X.
0.3954.90.981618841_s_atCF516604hypothetical protein LOC100259947-1e+0At4g36791unknown proteinO.I.H.G.S.X.
0.3853.60.971611008_atCF200658.1hypothetical protein LOC100262509-9e-30At1g5766060S ribosomal protein L21 (RPL21E)O.I.H.G.S.X.
0.3751.70.981613735_atCF209024hypothetical protein LOC100264792-4e-64At2g3273026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.3751.70.971607682_s_atCF213778hypothetical protein LOC100243930-1e-9At5g19980integral membrane family proteinO.I.H.G.S.X.
0.3548.50.971616462_atCF215132hypothetical protein LOC100252529-2e+1At5g57860ubiquitin family proteinO.I.H.G.S.X.
0.3446.80.971612148_atCB976186hypothetical protein LOC100252593-1e+0At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.3345.70.971621625_s_atCF513375hypothetical protein LOC100264067-5e-10At4g22360SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.3345.70.981619938_atCF514664hypothetical protein LOC100254408-2e-1At3g51950zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3243.10.981617050_atCF515290hypothetical protein LOC100249740-2e-2At1g11400PYM (Partner of Y14-Mago)O.I.H.G.S.X.
0.3243.10.981620466_atCB007446hypothetical protein LOC100246357-7e-27At5g56280CSN6AO.I.H.G.S.X.
0.3243.10.981622796_atCF208469hypothetical protein LOC100247561-2e-5At5g05920DHS (DEOXYHYPUSINE SYNTHASE)O.I.H.G.S.X.
0.3141.30.961609466_atCD797661hypothetical protein LOC100262838-3e-61At5g65270AtRABA4a (Arabidopsis Rab GTPase homolog A4a)O.I.H.G.S.X.
0.3039.40.971609115_atBQ794176hypothetical LOC100248456-7e-1At2g3541033 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeO.I.H.G.S.X.
0.3039.40.971607807_s_atCD801516hypothetical protein LOC100255985-4e-21At5g10960CCR4-NOT transcription complex protein, putativeO.I.H.G.S.X.
0.2937.70.971621300_atCB920384hypothetical protein LOC100244618-4e+0At4g23420short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.2937.70.971611673_atBQ799478hypothetical protein LOC100267328-4e+0At5g06000EIF3G2O.I.H.G.S.X.
0.2837.70.961609769_atCF215804hypothetical protein LOC100253103-1e+0At1g13635methyladenine glycosylase family proteinO.I.H.G.S.X.
0.2734.00.971608069_atCF405763hypothetical protein LOC100250173-2e-1At5g36925unknown proteinO.I.H.G.S.X.
0.2734.00.971618544_atCB976993similar to pumilio domain-containing protein PPD1-4e-20At4g25880APUM6 (Arabidopsis Pumilio 6)O.I.H.G.S.X.
0.2734.00.971619832_atCA818684hypothetical protein LOC100240976-1e-24At3g44660hda10 (histone deacetylase 10)O.I.H.G.S.X.
0.2734.00.981614010_atCF518977hypothetical LOC100246762-4e+0At1g60390BURP domain-containing protein / polygalacturonase, putativeO.I.H.G.S.X.
0.2734.00.971622265_atCB974618hypothetical protein LOC100242865-3e-1At5g15980pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2632.00.981610737_atCB346253hypothetical protein LOC100255417-7e-49At5g26360chaperonin, putativeO.I.H.G.S.X.
0.2428.70.981614966_atBQ796346similar to pumilio domain-containing protein PPD1-1e-9At2g29190APUM2 (Arabidopsis Pumilio 2)O.I.H.G.S.X.
0.2225.60.971617195_s_atCF518568hypothetical protein LOC100262509-1e-26At1g0959060S ribosomal protein L21 (RPL21A)O.I.H.G.S.X.
0.2225.60.971607031_atCF516821hypothetical protein LOC100242198-4e+0At5g52070agenet domain-containing proteinO.I.H.G.S.X.
0.2225.60.981616366_atCF215144hypothetical protein LOC100251921-3e-21At3g53500zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.2124.00.981611458_atCF207715hypothetical protein LOC100243644-2e-18At2g35530bZIP transcription factor family proteinO.I.H.G.S.X.
0.2124.00.971611391_atCF513307hypothetical protein LOC100256320-1e-15At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.
0.1819.40.971617707_atCF207480hypothetical protein LOC100248444-2e-6At5g61150VIP4 (VERNALIZATION INDEPENDENCE 4)O.I.H.G.S.X.
0.1819.40.981611640_atBQ793863hypothetical protein LOC100242037-4e-14At4g24470TIFY1O.I.H.G.S.X.
0.1616.70.981613303_atCB977627similar to plectin-related-3e-16At2g26770plectin-relatedO.I.H.G.S.X.
0.1313.30.981611483_atCF207449hypothetical protein LOC100253154-7e+0Atmg00320-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.784.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
1.683.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.683.3GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.683.3GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.581.7GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.581.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.581.7GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.479.9GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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