Co-expression analysis

Gene ID	1621111_at
Gene name	hypothetical protein LOC100254821
Homology with Arabidopsis	Similar to At4g33145: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.41
%ile	61.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.99	1621111_at	BQ798687	hypothetical protein LOC100254821	-	2e+0	At4g33145	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1622817_at	CD012829	hypothetical protein LOC100251895	-	4e-42	At2g40660	tRNA-binding region domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1614845_at	CF405772	hypothetical protein LOC100262902	-	1e+0	At1g65900	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1613818_at	BQ792651	hypothetical protein LOC100258929	-	2e-27	At5g22080	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.98	1621965_s_at	BQ793756	hypothetical protein LOC100247098	-	8e-36	At5g23540	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.99	1608425_at	CB910322	hypothetical protein LOC100267018	-	1e-1	At5g67510	60S ribosomal protein L26 (RPL26B)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.4	91.3	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.9	87.2	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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