Co-expression analysis

Gene ID 1621104_at
Gene name
Homology with ArabidopsisSimilar to At5g21140: emb1379 (embryo defective 1379) (HF=7e-1)
Module size 6 genes
NF 0.13
%ile 20.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.821621104_atCF568790--7e-1At5g21140emb1379 (embryo defective 1379)O.I.H.G.S.X.
0.2327.50.951620794_atCF568783--3e-13At4g1500060S ribosomal protein L27 (RPL27C)O.I.H.G.S.X.
0.1212.10.971606696_s_atBQ800381hypothetical protein LOC100241006-5e-13At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.H.G.S.X.
0.099.40.961611098_atCF519133--1e-3At5g51180unknown proteinO.I.H.G.S.X.
0.066.80.971614881_atCF210464hypothetical protein LOC100261031-1e-153At5g08670ATP binding / hydrogen ion transporting ATP synthase, rotational mechanismO.I.H.G.S.X.
0.066.80.981610944_atBQ794641hypothetical protein LOC100261610-1e-103At5g21274CAM6 (CALMODULIN 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
3.294.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
3.194.6GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.893.4GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.793.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.692.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.390.7GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.390.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.289.9GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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