Co-expression analysis

Gene ID 1621103_at
Gene name
Homology with ArabidopsisSimilar to At3g04570: DNA-binding protein-related (HF=2e-12)
Module size 6 genes
NF 0.03
%ile 6.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.811621103_atCB003423--2e-12At3g04570DNA-binding protein-relatedO.I.H.G.S.X.
0.088.50.951616071_atCB978649hypothetical protein LOC100259260-5e-58At3g18480AtCASP (Arabidopsis thaliana CCAAT-displacement protein alternatively spliced product)O.I.H.G.S.X.
0.077.80.951606496_atCB979201--1e+0At3g47410unknown proteinO.I.H.G.S.X.
0.023.20.951617471_atBQ796087hypothetical protein LOC100266752-1e+0Atmg00850-O.I.H.G.S.X.
0.012.10.961606655_atCD800950hypothetical protein LOC100240850-6e-2At5g67580TRB2O.I.H.G.S.X.
0.012.10.951611793_atCD006487--2e-5At3g58470methyltransferase/ nucleic acid bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.5100.0GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.796.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
3.395.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.395.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.194.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.893.4GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.793.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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