Co-expression analysis

Gene ID 1621082_a_at
Gene name hypothetical protein LOC100262185
Homology with ArabidopsisSimilar to At5g02800: protein kinase family protein (HF=3e-13)
Module size 6 genes
NF 0.32
%ile 46.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.971621082_a_atCF516167hypothetical protein LOC100262185-3e-13At5g02800protein kinase family proteinO.I.H.G.S.X.
0.4666.50.971620560_atCB002563hypothetical protein LOC100261542-1e+0At4g40080epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.4464.10.981614589_atBQ799749hypothetical protein LOC100251600-4e-1At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.3345.70.971609185_atCB972681similar to TGA-type basic leucine zipper protein TGA2.2-2e-6At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.2632.00.971612894_atCD012284hypothetical protein LOC100252013-2e-28At4g39100SHL1 (short life)O.I.H.G.S.X.
0.1313.30.971620927_atCF216010hypothetical protein LOC100252969-4e-1At5g09660PMDH2 (peroxisomal NAD-malate dehydrogenase 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.398.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.198.1GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.597.5GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.497.3GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.096.7GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.495.5GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.495.5GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.893.4GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436398V. riparia (VR, PI588259) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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