Co-expression analysis

Gene ID 1621069_at
Gene name
Homology with ArabidopsisSimilar to At5g48175: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.02
%ile 5.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.801621069_atCD008619--5e+0At5g48175unknown proteinO.I.H.G.S.X.
0.1313.30.971607084_atCF413859--3e-7At1g06515unknown proteinO.I.H.G.S.X.
0.1313.30.971615095_atCB347601hypothetical protein LOC100266582-3e-77At5g61670-O.I.H.G.S.X.
0.1212.10.981620220_atCB345823hypothetical protein LOC100243115-7e-46At5g54760eukaryotic translation initiation factor SUI1, putativeO.I.H.G.S.X.
0.056.00.951609587_atCF202068.1--5e-9At1g32220binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.012.10.951607487_atCD797833hypothetical protein LOC100247070-1e+0At5g15170tyrosyl-DNA phosphodiesterase-relatedO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3650.70.971610524_s_atCD798339similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding-1e-52At3g12580HSP70 (heat shock protein 70)O.I.H.G.S.X.
0.3650.70.971606498_s_atCF214775ascorbate peroxidase-7e-22At3g09640APX2 (ASCORBATE PEROXIDASE 2)O.I.H.G.S.X.
0.3141.30.951620101_atCB971892hypothetical protein LOC100243466-3e-15At1g02860NLA (nitrogen limitation adaptation)O.I.H.G.S.X.
0.2734.00.971621364_s_atCF511664hypothetical protein LOC100252604-2e-12At2g24940AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2)O.I.H.G.S.X.
0.2327.50.931611444_atCF211599--2e-1At2g40310glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.
0.2225.60.921622401_atCF403548--3e+0At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.H.G.S.X.
0.2225.60.961609958_atBQ800106similar to PPX2 (protein phosphatase x-2); protein serine/threonine phosphatase-1e+0At1g04040acid phosphatase class B family proteinO.I.H.G.S.X.
0.2022.40.911606580_atCB922451--8e-6At5g65540unknown proteinO.I.H.G.S.X.
0.1920.90.921616008_atCF516120--1e+0At4g02040unknown proteinO.I.H.G.S.X.
0.1920.90.961607434_s_atCF513919S-adenosylmethionine synthetase 4-2e-158At4g01850SAM-2 (S-ADENOSYLMETHIONINE SYNTHETASE 2)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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