Co-expression analysis

Gene ID 1621069_at
Gene name
Homology with ArabidopsisSimilar to At5g48175: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.02
%ile 5.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.801621069_atCD008619--5e+0At5g48175unknown proteinO.I.H.G.S.X.
0.1313.30.971607084_atCF413859--3e-7At1g06515unknown proteinO.I.H.G.S.X.
0.1313.30.971615095_atCB347601hypothetical protein LOC100266582-3e-77At5g61670-O.I.H.G.S.X.
0.1212.10.981620220_atCB345823hypothetical protein LOC100243115-7e-46At5g54760eukaryotic translation initiation factor SUI1, putativeO.I.H.G.S.X.
0.056.00.951609587_atCF202068.1--5e-9At1g32220binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.012.10.951607487_atCD797833hypothetical protein LOC100247070-1e+0At5g15170tyrosyl-DNA phosphodiesterase-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436424V. riparia (VR, PI588259) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage