Co-expression analysis

Gene ID	1621047_at
Gene name
Homology with Arabidopsis	Similar to At1g71050: heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related (HF=1e+0)
Module size	23 genes
NF	0.39
%ile	57.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	99.0	0.95	1621047_at	CB968782	-	-	1e+0	At1g71050	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.95	1608192_at	CB982511	hypothetical protein LOC100259233	-	2e-19	At5g13180	ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.96	1614977_at	CB978594	-	-	2e+1	At5g17480	APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1615365_at	CB973771	hypothetical protein LOC100253158	-	2e-14	At1g54130	RSH3 (RELA/SPOT HOMOLOG 3)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1608047_at	CF405221	hypothetical protein LOC100267805	-	1e-5	At3g10260	reticulon family protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.96	1617283_at	CF372456	hypothetical LOC100245758	-	4e-20	At3g49680	BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1611249_s_at	CF517155	hypothetical protein LOC100255334	-	6e-29	At1g51410	cinnamyl-alcohol dehydrogenase, putative (CAD)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1622662_at	CF510959	hypothetical protein LOC100249169	-	1e-47	At5g23670	LCB2	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1621720_at	CD801738	hypothetical protein LOC100265034	-	1e-33	At1g45332	mitochondrial elongation factor, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1621866_at	CF414716	similar to Putative autophagy-related protein 12	-	8e-33	At1g54210	ATG12A (AUTOPHAGY 12 A)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.98	1614352_at	CD801544	hypothetical protein LOC100244495	-	2e-15	At5g42000	ORMDL family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.96	1621760_at	BQ794397	hypothetical protein LOC100241392	-	1e-8	At1g50640	ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1619908_at	CD798796	hypothetical protein LOC100265022	-	2e-5	At3g55640	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1606431_at	BQ796467	hypothetical protein LOC100242612	-	6e-1	At3g26980	MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.97	1613721_at	CF372597	hypothetical protein LOC100264633	-	2e-19	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1608239_at	CF372130	hypothetical protein LOC100249651	-	6e-36	At2g24765	ARF3 (ADP-RIBOSYLATION FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1615601_at	BQ792209	hypothetical protein LOC100265898	-	5e-9	At4g02370	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1616691_at	CD715631	similar to phosphatidylserine decarboxylase	-	1e-29	At5g57190	PSD2 (phosphatidylserine decarboxylase 2)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.96	1615947_at	CB973630	hypothetical protein LOC100263087	-	6e-41	At5g26710	glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.95	1608842_at	CD800895	-	-	4e-41	At1g80500	-	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.97	1606989_at	CA818541	similar to putative protein	-	3e-4	At5g01350	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.98	1614858_at	CD801986	hypothetical protein LOC100258231	-	1e-6	At5g04430	BTR1L (BINDING TO TOMV RNA 1L (LONG FORM))	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.97	1614694_at	CF209205	hypothetical protein LOC100253296	-	2e+0	At5g02620	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.1	89.1	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.0	88.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.0	88.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.8	86.0	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
1.7	84.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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