Co-expression analysis

Gene ID 1621016_at
Gene name similar to transporter-related
Homology with ArabidopsisSimilar to At5g20380: PHT4 (HF=3e-10)
Module size 6 genes
NF 0.60
%ile 87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.971621016_atCA817314similar to transporter-related-3e-10At5g20380PHT4O.I.H.G.S.X.
0.7390.80.971612074_atCB339898similar to kinesin like protein-6e-21At5g51720unknown proteinO.I.H.G.S.X.
0.6787.90.971607482_atCB342115--7e-16At5g02790In2-1 protein, putativeO.I.H.G.S.X.
0.6081.90.971609736_atCA812857hypothetical protein LOC100248605-6e-6At2g34460flavin reductase-relatedO.I.H.G.S.X.
0.4666.50.971622679_atCD798070hypothetical protein LOC100257992-1e-20At5g06220-O.I.H.G.S.X.
0.4057.70.971612484_atCF510569hypothetical protein LOC100254359 /// hypothetical protein LOC100267643-7e-8At5g10470kinesin motor protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.491.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.390.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.390.7GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.189.1GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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