Co-expression analysis

Gene ID	1621016_at
Gene name	similar to transporter-related
Homology with Arabidopsis	Similar to At5g20380: PHT4 (HF=3e-10)
Module size	6 genes
NF	0.60
%ile	87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1621016_at	CA817314	similar to transporter-related	-	3e-10	At5g20380	PHT4	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.97	1612074_at	CB339898	similar to kinesin like protein	-	6e-21	At5g51720	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1607482_at	CB342115	-	-	7e-16	At5g02790	In2-1 protein, putative	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1609736_at	CA812857	hypothetical protein LOC100248605	-	6e-6	At2g34460	flavin reductase-related	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1622679_at	CD798070	hypothetical protein LOC100257992	-	1e-20	At5g06220	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1612484_at	CF510569	hypothetical protein LOC100254359 /// hypothetical protein LOC100267643	-	7e-8	At5g10470	kinesin motor protein-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.4	91.3	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.4	91.3	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.2	89.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.1	89.1	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
1.9	87.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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