Co-expression analysis

Gene ID 1621006_at
Gene name
Homology with ArabidopsisSimilar to At5g24820: aspartyl protease family protein (HF=5e+0)
Module size 8 genes
NF 0.45
%ile 67.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4260.10.981621006_atCF513092--5e+0At5g24820aspartyl protease family proteinO.I.H.G.S.X.
0.7189.50.991619563_atCF514348hypothetical protein LOC100255371-6e-3At5g41770crooked neck protein, putative / cell cycle protein, putativeO.I.H.G.S.X.
0.5779.80.991613432_atCF516959hypothetical protein LOC100244217-1e-15At1g676807S RNA bindingO.I.H.G.S.X.
0.5072.70.991611483_atCF207449hypothetical protein LOC100253154-7e+0Atmg00320-O.I.H.G.S.X.
0.4464.10.991615281_atCD800042hypothetical protein LOC100241659-2e-17At3g26560ATP-dependent RNA helicase, putativeO.I.H.G.S.X.
0.4361.50.991614110_s_atCD801616cullin 1-2e-19At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.
0.3954.90.991608425_atCB910322hypothetical protein LOC100267018-1e-1At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.2734.00.991621149_atCF514701similar to 60S ribosomal protein L19-3e-79At1g02780emb2386 (embryo defective 2386)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9Link to GEO
2.793.0GSM147698Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation27Link to GEO
2.390.7GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO
2.390.7GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.289.9GSM147697Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation26Link to GEO
2.088.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.088.2GSM436384Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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