Co-expression analysis

Gene ID 1621000_at
Gene name hypothetical protein LOC100245551
Homology with ArabidopsisSimilar to At1g06180: ATMYB13 (MYB DOMAIN PROTEIN 13) (HF=1e+0)
Module size 9 genes
NF 0.23
%ile 33.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.961621000_atCF209896hypothetical protein LOC100245551-1e+0At1g06180ATMYB13 (MYB DOMAIN PROTEIN 13)O.I.H.G.S.X.
0.4057.70.961617573_atCF405014hypothetical protein LOC100266600-2e-6At4g28100unknown proteinO.I.H.G.S.X.
0.3141.30.971619627_atCB976213hypothetical protein LOC100257983-4e-6At5g04560DME (DEMETER)O.I.H.G.S.X.
0.3039.40.971608829_atCD802477hypothetical protein LOC100258592-9e-24At4g03415catalytic/ protein serine/threonine phosphataseO.I.H.G.S.X.
0.2530.50.971608070_atCF214791hypothetical protein LOC100245501-1e+0At4g10880unknown proteinO.I.H.G.S.X.
0.2428.70.981614917_atCF372079hypothetical protein LOC100267340-4e+0At5g60660PIP2O.I.H.G.S.X.
0.2124.00.961615121_atCK138189.1hypothetical protein LOC100253823-1e-9At3g57780-O.I.H.G.S.X.
0.1313.30.961618343_atCB341499hypothetical protein LOC100242968-2e-9At1g15490hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.1212.10.971611678_atCF512915hypothetical protein LOC100245914-2e-3At1g56580unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.993.8GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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