Co-expression analysis

Gene ID	1620990_at
Gene name	hypothetical protein LOC100247103
Homology with Arabidopsis	Similar to At1g19330: unknown protein (HF=1e-18)
Module size	8 genes
NF	0.64
%ile	90.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.5	0.98	1620990_at	CF511811	hypothetical protein LOC100247103	-	1e-18	At1g19330	unknown protein	O.I.	H.G.	S.X.	Please select
0.74	91.0	0.98	1615779_at	CF415379	hypothetical protein LOC100263332	-	2e+1	At5g16567	unknown protein	O.I.	H.G.	S.X.	Please select
0.70	88.6	0.98	1617357_at	CB921493	hypothetical protein LOC100263238	-	3e-25	At5g57410	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1622127_at	CK138186.1	hypothetical LOC100262546	-	9e-1	At3g50070	CYCD3	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1606978_s_at	CF207835	hypothetical protein LOC100242245	-	5e-1	At1g16680	DNAJ heat shock N-terminal domain-containing protein / S-locus protein, putative	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.98	1607831_at	BQ799075	hypothetical protein LOC100249242	-	8e-7	At3g03950	protein binding	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1616515_at	CF211788	hypothetical protein LOC100259212	-	5e+0	At5g44900	transmembrane receptor	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1612058_at	CF513284	hypothetical protein LOC100259015	-	3e-15	At2g33845	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.7	93.0	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.5	91.9	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.1	89.1	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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