Co-expression analysis

Gene ID	1620975_at
Gene name	hypothetical protein LOC100258366
Homology with Arabidopsis	Similar to At1g11890: SEC22 (HF=7e-55)
Module size	8 genes
NF	0.57
%ile	84.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.7	0.99	1620975_at	BQ798236	hypothetical protein LOC100258366	-	7e-55	At1g11890	SEC22	O.I.	H.G.	S.X.	Please select
0.75	91.3	0.99	1606962_at	CF405430	hypothetical protein LOC100244131	-	4e-13	At5g14240	-	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1609981_at	CF207945	hypothetical protein LOC100247386	-	2e-11	At5g20910	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.99	1622560_at	CF211302	hypothetical protein LOC100265315	-	3e-27	At3g52850	VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1607141_at	CD712648	hypothetical protein LOC100254376	-	1e-77	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.99	1612909_at	CF404929	hypothetical protein LOC100264659	-	3e-8	At3g28970	AAR3 (antiauxin-resistant 3)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1607648_s_at	CB348223	hypothetical protein LOC100241287	-	1e-7	At1g08480	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.99	1619569_at	CF211443	hypothetical protein LOC100250036	-	2e-30	At2g26590	adhesion regulating molecule family	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	99.1	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
4.2	97.1	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
3.1	94.6	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.9	93.8	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.7	93.0	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.4	91.3	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.9	87.2	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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