Co-expression analysis

Gene ID	1620940_at
Gene name
Homology with Arabidopsis	Similar to At5g66990: RWP-RK domain-containing protein (HF=2e+1)
Module size	7 genes
NF	0.24
%ile	34.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.72	1620940_at	CF201899.1	-	-	2e+1	At5g66990	RWP-RK domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1618231_at	AF141642.1	-	-	8e-50	At2g37170	PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.94	1608165_at	CF205571.1	-	-	2e+0	At1g03660	-	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.94	1617743_at	CF201643.1	-	-	2e-12	At1g52870	peroxisomal membrane protein-related	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1611368_at	CF203753.1	-	-	6e-18	At4g35090	CAT2 (CATALASE 2)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.85	1620723_at	CF204991.1	-	-	2e-23	At5g52240	MSBP1 (membrane steroid binding protein 1)	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.83	1615055_at	CK138121.1	-	-	3e-19	At3g48030	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	99.4	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
5.5	98.4	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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