Co-expression analysis

Gene ID 1620915_at
Gene name
Homology with ArabidopsisSimilar to At2g17740: DC1 domain-containing protein (HF=2e-1)
Module size 7 genes
NF 0.59
%ile 86.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.10.961620915_atCF511488--2e-1At2g17740DC1 domain-containing proteinO.I.H.G.S.X.
0.8695.10.941606489_atCF603755hypothetical protein LOC100246245-4e-13At4g25835AAA-type ATPase family proteinO.I.H.G.S.X.
0.7189.50.941615257_atCB972713hexose transporter-like-6e-12At4g35300TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)O.I.H.G.S.X.
0.6384.30.951614297_atBQ796093hypothetical protein LOC100264651-2e-6At4g32000protein kinase family proteinO.I.H.G.S.X.
0.5679.40.951614444_atCF517160hypothetical protein LOC100248687-1e+0At1g49650cell death associated protein-relatedO.I.H.G.S.X.
0.5072.70.951619667_atBQ797924similar to DRT100-8e-1At5g06860PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1)O.I.H.G.S.X.
0.3650.70.951607883_atCB969241hypothetical protein LOC100255480-5e+0At5g49215glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.194.6GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
3.194.6GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.793.0GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.692.5GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.591.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.390.7GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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