Co-expression analysis

Gene ID 1620869_at
Gene name
Homology with ArabidopsisSimilar to At5g13190: - (HF=2e-8)
Module size 7 genes
NF 0.32
%ile 46.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.951620869_atBQ792836--2e-8At5g13190-O.I.H.G.S.X.
0.6081.90.961620016_atCA814656hypothetical protein LOC100262414-3e-27At4g18040EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E)O.I.H.G.S.X.
0.3141.30.951611374_atCF211300--4e-43At5g03240UBQ3 (POLYUBIQUITIN 3)O.I.H.G.S.X.
0.2327.50.951622452_atCB982621--2e+0At4g25560AtMYB18 (myb domain protein 18)O.I.H.G.S.X.
0.2124.00.951621674_atCF515644hypothetical protein LOC100246584-2e-27At3g56950SIP2O.I.H.G.S.X.
0.2022.40.951617416_s_atCA809462hypothetical protein LOC100264435-4e-53At4g16520ATG8F (autophagy 8f)O.I.H.G.S.X.
0.2022.40.951614793_atCB005321hypothetical protein LOC100255856-2e+0At5g66053unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.289.9GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.088.2GSM436406V. riparia (VR, PI588259) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
1.987.2GSM436362Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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