Co-expression analysis

Gene ID 1620867_at
Gene name hypothetical protein LOC100246928
Homology with ArabidopsisSimilar to At1g28680: transferase family protein (HF=8e-2)
Module size 7 genes
NF 0.34
%ile 49.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.921620867_atCK138217.1hypothetical protein LOC100246928-8e-2At1g28680transferase family proteinO.I.H.G.S.X.
0.6183.20.921614643_atCF214966caffeoyl-CoA O-methyltransferase-6e-53At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.5072.70.901611897_s_atCB347033hypothetical protein LOC100243978-1e-47At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.3650.70.951614836_s_atBQ794862S-adenosylmethionine synthetase 5-0At1g02500SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)O.I.H.G.S.X.
0.3345.70.931615522_atCF212682--7e+0At5g16870aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.2022.40.911614423_atCF517687hypothetical protein LOC100251623-1e-3At1g80820CCR2 (CINNAMOYL COA REDUCTASE)O.I.H.G.S.X.
0.1313.30.931619767_atBQ797930hypothetical protein LOC100251717-6e-13At2g37240-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.692.5GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.491.3GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.390.7GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.390.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.390.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.289.9GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.189.1GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO
2.189.1GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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