Co-expression analysis

Gene ID 1620866_at
Gene name hypothetical protein LOC100245423
Homology with ArabidopsisSimilar to At5g38400: unknown protein (HF=6e-2)
Module size 6 genes
NF 0.35
%ile 50.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.971620866_atCD802107hypothetical protein LOC100245423-6e-2At5g38400unknown proteinO.I.H.G.S.X.
0.5577.30.981617677_atBQ792990hypothetical protein LOC100260994-2e-1At3g48890ATMP2O.I.H.G.S.X.
0.4361.50.981607335_atCD801694hypothetical protein LOC100245908-1e-20At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.3345.70.971618263_atCB005191hypothetical protein LOC100252374-7e-21At4g17830peptidase M20/M25/M40 family proteinO.I.H.G.S.X.
0.3039.40.971620947_atCB341977hypothetical protein LOC100257258-8e-47At5g53850haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.1819.40.971614839_s_atCB978167hypothetical protein LOC100251023-3e-10At1g04290thioesterase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.094.2GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287890Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.793.0GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287895Pink soft berry B13 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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