Co-expression analysis

Gene ID 1620857_at
Gene name
Homology with ArabidopsisSimilar to At1g13635: methyladenine glycosylase family protein (HF=4e-2)
Module size 18 genes
NF 0.56
%ile 82.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.931620857_atCF207003.1--4e-2At1g13635methyladenine glycosylase family proteinO.I.H.G.S.X.
0.7189.50.951607238_a_atCB973156hypothetical protein LOC100246539-6e-1At2g06925PLA2-ALPHAO.I.H.G.S.X.
0.7088.60.951617003_atCF205278.1--2e-2At1g69760unknown proteinO.I.H.G.S.X.
0.6888.00.961612870_s_atCF201540.1hypothetical protein LOC100267310-3e+0At2g18380transcription factorO.I.H.G.S.X.
0.6384.30.961620272_atBQ797367hypothetical protein LOC100252883-2e+0At2g37330ALS3 (ALUMINUM SENSITIVE 3)O.I.H.G.S.X.
0.6183.20.961609811_atCF208639--4e+0At5g37850SOS4 (SALT OVERLY SENSITIVE 4)O.I.H.G.S.X.
0.6081.90.971609018_atCF204139.1--1e+0At3g44580unknown proteinO.I.H.G.S.X.
0.5679.40.971611884_atCF569214.1--1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.5475.70.961621749_x_atCF569214.1--1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.5173.20.951610035_x_atCF202356.1hypothetical protein LOC100248145-4e-22At1g04410malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.5173.20.961616660_s_atCF569214.1similar to 60S ribosomal protein L19-1e+0At4g29960unknown proteinO.I.H.G.S.X.
0.4969.30.961611129_s_atCB005644hypothetical protein LOC100261235-2e+0At2g06200AtGRF6 (GROWTH-REGULATING FACTOR 6)O.I.H.G.S.X.
0.4666.50.951613558_atCD801773--3e+0At5g52210ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)O.I.H.G.S.X.
0.4361.50.961619939_atCB971326--2e+1At5g43430ETFBETAO.I.H.G.S.X.
0.4158.70.971621992_s_atBQ793824hypothetical protein LOC100259183-2e-11At5g66290unknown proteinO.I.H.G.S.X.
0.3954.90.971607612_atCF202447.1hypothetical protein LOC100262044-2e-12At4g31300PBA1O.I.H.G.S.X.
0.3650.70.961617552_atCF202269.1hypothetical protein LOC100243817-4e-35At4g35020ARAC3 (ARABIDOPSIS RAC-LIKE 3)O.I.H.G.S.X.
0.3650.70.971615354_atCF210983--2e-11At2g20930-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.597.5GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.088.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
1.987.2GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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