Co-expression analysis

Gene ID 1620823_at
Gene name hypothetical protein LOC100259897
Homology with ArabidopsisSimilar to At1g69790: protein kinase, putative (HF=1e-7)
Module size 7 genes
NF 0.07
%ile 13.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8695.10.941620823_atCD012525hypothetical protein LOC100259897-1e-7At1g69790protein kinase, putativeO.I.H.G.S.X.
0.2327.50.961611946_s_atCF373318hypothetical protein LOC100260940-1e-1At5g04220SYTCO.I.H.G.S.X.
0.1111.30.941609527_atCD802146hypothetical protein LOC100246030 /// hypothetical protein LOC100257953-1e+0At5g55080AtRAN4 (Ras-related nuclear protein 4)O.I.H.G.S.X.
0.056.00.961609403_atCF205431.1hypothetical protein LOC100257937-7e-6At5g47650ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2)O.I.H.G.S.X.
0.045.20.961622676_s_atCF212246hypothetical protein LOC100247010-3e-16At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.034.20.961608024_atCF405656hypothetical protein LOC100263017-2e-1At3g28490oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.023.20.961622488_atCF373160hypothetical protein LOC100262283-4e-25At1g50570C2 domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.6GSM436352Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.896.4GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM436353Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436382Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436385Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436362Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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