Co-expression analysis

Gene ID	1620764_a_at
Gene name	hypothetical protein LOC100261589
Homology with Arabidopsis	Similar to At1g07920: elongation factor 1-alpha / EF-1-alpha (HF=0)
Module size	10 genes
NF	0.47
%ile	70.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.9	0.98	1620764_a_at	CB348714	hypothetical protein LOC100261589	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1615260_at	CF372907	similar to FAD-binding domain-containing protein	-	4e-4	At1g32310	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.99	1618385_at	CF518525	hypothetical protein LOC100246711	-	0	At1g07940	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.99	1610944_at	BQ794641	hypothetical protein LOC100261610	-	1e-103	At5g21274	CAM6 (CALMODULIN 6)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1612979_at	CF208013	hypothetical protein LOC100243586	-	3e-61	At2g21260	mannose 6-phosphate reductase (NADPH-dependent), putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1615356_at	CF403414	hypothetical protein LOC100267033	-	3e-5	At3g53310	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1617139_s_at	CF202008.1	hypothetical protein LOC100246711	-	7e+0	At5g37580	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1612829_at	BQ797707	hypothetical protein LOC100247114	-	2e-93	At4g34720	AVA-P1	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1622387_s_at	CF514535	hypothetical protein LOC100245490	-	1e-28	At5g47570	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.99	1608749_at	CB980219	hypothetical protein LOC100241808	-	5e-10	At1g21170	SEC5B	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.4	91.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.1	89.1	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.9	87.2	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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