Co-expression analysis

Gene ID	1620747_at
Gene name	hypothetical protein LOC100245397
Homology with Arabidopsis	Similar to At4g08900: arginase (HF=3e-29)
Module size	6 genes
NF	0.54
%ile	80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1620747_at	CF210152	hypothetical protein LOC100245397	-	3e-29	At4g08900	arginase	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.96	1611885_at	CB343939	hypothetical protein LOC100263250	-	6e-27	At1g06820	CRTISO (CAROTENOID ISOMERASE)	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.96	1609810_at	CF608775	hypothetical protein LOC100245397	-	3e-32	At4g08900	arginase	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1613422_at	CB345462	-	-	5e-1	At5g65165	SDH2-3	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1615851_at	CD713329	hypothetical protein LOC100261174	-	6e-12	At5g16290	acetolactate synthase small subunit, putative	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.96	1608227_at	CF518942	hypothetical protein LOC100255896	-	1e+0	At5g66930	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	98.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
4.5	97.5	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
3.7	96.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.6	96.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.5	95.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.5	95.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.3	95.2	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
3.1	94.6	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.9	93.8	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.9	93.8	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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