Co-expression analysis

Gene ID 1620745_at
Gene name
Homology with ArabidopsisSimilar to At5g62750: unknown protein (HF=8e-2)
Module size 6 genes
NF 0.01
%ile 1.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.741620745_atCD714773--8e-2At5g62750unknown proteinO.I.H.G.S.X.
0.1515.60.941618975_atCD006441--4e-4At1g55680WD-40 repeat family proteinO.I.H.G.S.X.
0.056.00.911606587_atCD719586--6e-6At1g27510-O.I.H.G.S.X.
0.045.20.941617607_atCB918932--3e-2At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)O.I.H.G.S.X.
0.012.10.951613809_atCF372821hypothetical protein LOC100247494-3e-50At1g69340appr-1-p processing enzyme family proteinO.I.H.G.S.X.
-0.50.931615799_atCB976058hypothetical protein LOC100259068-1e+0At2g29810kelch repeat-containing F-box family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.598.4GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.196.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.996.6GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.896.4GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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