Co-expression analysis

Gene ID 1620744_at
Gene name hypothetical protein LOC100248911
Homology with ArabidopsisSimilar to At1g20340: DRT112 (HF=2e-6)
Module size 6 genes
NF 0.59
%ile 85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.991620744_atCF403966hypothetical protein LOC100248911-2e-6At1g20340DRT112O.I.H.G.S.X.
0.5980.60.981617646_atCB340164hypothetical protein LOC100261565-4e-26At5g16400ATF2O.I.H.G.S.X.
0.5577.30.981611733_s_atBQ797982hypothetical protein LOC100240928-2e-12At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.5072.70.991618370_atCF510718hypothetical protein LOC100242802-8e-31At4g12800PSAL (photosystem I subunit L)O.I.H.G.S.X.
0.4666.50.991619903_atCD720479hypothetical protein LOC100263275-8e-71At3g54890LHCA1O.I.H.G.S.X.
0.4057.70.981614598_atCF373065hypothetical protein LOC100266604-2e-4At3g08940LHCB4.2 (light harvesting complex PSII)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.094.2GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3Link to GEO
2.591.9GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
2.491.3GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436412V. riparia (VR, PI588259) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
1.987.2GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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