Co-expression analysis

Gene ID 1620723_at
Gene name
Homology with ArabidopsisSimilar to At5g52240: MSBP1 (membrane steroid binding protein 1) (HF=2e-23)
Module size 14 genes
NF 0.73
%ile 95.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.891620723_atCF204991.1--2e-23At5g52240MSBP1 (membrane steroid binding protein 1)O.I.H.G.S.X.
0.8695.10.941622617_x_atCF203983.1--3e-25At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.7792.30.931610244_x_atCF204556.1hypothetical protein LOC100261052-1e-3At4g1500060S ribosomal protein L27 (RPL27C)O.I.H.G.S.X.
0.7691.50.931612496_atCB001447--3e-17At2g29550TUB7O.I.H.G.S.X.
0.7591.30.921608112_atCF202508.1--8e-15At1g77510ATPDIL1-2 (PDI-LIKE 1-2)O.I.H.G.S.X.
0.7390.80.941615840_atCF206240.1--2e-36At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)O.I.H.G.S.X.
0.7289.70.921620878_atCF202635.1--5e-10At3g51250senescence/dehydration-associated protein-relatedO.I.H.G.S.X.
0.7189.50.941619492_atCK136879.1--5e+0At5g65410HB25 (HOMEOBOX PROTEIN 25)O.I.H.G.S.X.
0.6787.90.931621812_x_atCK138131.1--1e-37At1g2740060S ribosomal protein L17 (RPL17A)O.I.H.G.S.X.
0.6787.90.941613001_a_atCF212909hypothetical protein LOC100266839-1e-22At1g52370ribosomal protein L22 family proteinO.I.H.G.S.X.
0.6787.90.941607051_x_atCK138150.1--9e-42At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.6585.00.931614101_atCF569218.1--4e+0At5g45973unknown proteinO.I.H.G.S.X.
0.6183.20.921622150_atCK138131.1--1e-37At1g2740060S ribosomal protein L17 (RPL17A)O.I.H.G.S.X.
0.5779.80.941615025_atCK138150.1--9e-42At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436361Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.784.7GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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