Co-expression analysis

Gene ID	1620717_at
Gene name	hypothetical protein LOC100255378
Homology with Arabidopsis	Similar to At5g58430: ATEXO70B1 (exocyst subunit EXO70 family protein B1) (HF=3e-15)
Module size	6 genes
NF	0.27
%ile	38.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.97	1620717_at	BQ799683	hypothetical protein LOC100255378	-	3e-15	At5g58430	ATEXO70B1 (exocyst subunit EXO70 family protein B1)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1616171_at	BM437490	hypothetical protein LOC100251471	-	3e-18	At5g48380	leucine-rich repeat family protein / protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1611619_at	CB968961	similar to putative GTPase activating protein	-	4e-3	At3g07940	zinc finger and C2 domain protein, putative	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1614588_s_at	CF406014	hypothetical protein LOC100253521	-	8e-2	At3g12100	cation efflux family protein / metal tolerance protein, putative	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1611250_at	CB922487	hypothetical protein LOC100249628	-	9e-4	At4g24100	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.97	1612309_at	CB342376	hypothetical protein LOC100245361 /// hypothetical protein LOC100263480	-	7e-2	At2g37195	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.7	99.9	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
6.2	98.8	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.9	98.6	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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