Co-expression analysis

Gene ID 1620683_at
Gene name hypothetical protein LOC100245630
Homology with ArabidopsisSimilar to At4g26160: ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1) (HF=8e-9)
Module size 6 genes
NF 0.69
%ile 93.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951620683_atCA811381hypothetical protein LOC100245630-8e-9At4g26160ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)O.I.H.G.S.X.
0.7189.50.931608259_atCF205412.1hypothetical protein LOC100255358-2e-6At5g59520ZIP2O.I.H.G.S.X.
0.6787.90.961622760_atCD719223hypothetical protein LOC100266427-1e+0At3g61920unknown proteinO.I.H.G.S.X.
0.6183.20.941619820_s_atCA811381hypothetical protein LOC100245630-8e-9At4g26160ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)O.I.H.G.S.X.
0.4057.70.951618607_s_atCB972339hypothetical protein LOC100255358-1e-3At1g55910ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)O.I.H.G.S.X.
0.4057.70.961617846_atCF210020hypothetical protein LOC100242395-2e-47At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.189.1GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os05g0200100, orthologous to the query gene, 1620683_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7893.4Os05g0200100At4g26160-Thioredoxin-related domain containing protein3e-30At4g29670thioredoxin family proteinO.I.H.G.S.X.
0.6382.7Os05g0571400At4g26160-Conserved hypothetical protein4e-4At1g64355unknown proteinO.I.H.G.S.X.
0.5877.0Os02g0610800At4g26160-Protein of unknown function DUF1092 family protein7e-1At4g39260GR-RBP8O.I.H.G.S.X.
0.5573.7Os05g0404200At4g26160-Methionine sulfoxide reductase B domain containingprotein2e-18At4g21860MSRB2 (methionine sulfoxide reductase B 2)O.I.H.G.S.X.
0.5471.9Os05g0388500At4g26160-50S ribosomal protein L12e-26At3g63490ribosomal protein L1 family proteinO.I.H.G.S.X.
0.5471.9Os06g0146300At4g26160-Conserved hypothetical protein6e-2At5g27560unknown proteinO.I.H.G.S.X.
0.5371.3Os03g0331600At4g26160-Conserved hypothetical protein2e-12At5g58250unknown proteinO.I.H.G.S.X.
0.5269.6Os08g0167500At4g26160--1e-5At2g47910CRR6 (chlororespiratory reduction 6)O.I.H.G.S.X.
0.4660.9Os05g0481000At4g26160-Serine/threonine protein phosphatase 2B catalyticsubunit, beta isoform (EC 3.1.3.16) (Calmodulin-dependentcalcineurin A subunit, beta isoform) (CAM-PRP catalyticsubunit). Splice isoform 21e-17At1g32070ATNSI (NUCLEAR SHUTTLE INTERACTING)O.I.H.G.S.X.
0.4458.1Os02g0794400At4g26160-Initiation factor 3 family protein2e-1At4g31150endonuclease V family proteinO.I.H.G.S.X.
0.4253.9Os08g0562100At4g26160-Sorghum chloroplast CM3 malate dehydrogenase(NADP) (Fragment)7e-20At5g58330malate dehydrogenase (NADP), chloroplast, putativeO.I.H.G.S.X.
0.4152.4Os03g0729200At4g26160-Conserved hypothetical protein6e-1At5g65840-O.I.H.G.S.X.
0.4051.1Os07g0260300At4g26160-Thioredoxin-like domain containing protein2e-4At1g21350antioxidant/ oxidoreductaseO.I.H.G.S.X.
0.3846.9Os07g0204900At4g26160-Zeta-carotene desaturase (Fragment)1e-19At3g04870ZDS (ZETA-CAROTENE DESATURASE)O.I.H.G.S.X.
0.3338.8Os02g0567100At4g26160-Thioredoxin-related domain containing protein7e+0At5g28820unknown proteinO.I.H.G.S.X.
0.3134.5Os09g0249900At4g26160-Ferredoxin-thioredoxin reductase (Fragment)2e-18At2g04700ferredoxin thioredoxin reductase catalytic beta chain family proteinO.I.H.G.S.X.
0.2931.1Os01g0924000At4g26160-Chloroplast 50S ribosomal protein L27 (Fragment)6e-2At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)O.I.H.G.S.X.
0.2831.1Os01g0798500At4g26160-Malate synthase-like family protein2e-3At5g44650unknown proteinO.I.H.G.S.X.
0.2422.4Os01g0633000At4g26160-Ribosomal protein L31 family protein4e-1At4g03590-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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