Co-expression analysis

Gene ID 1620683_at
Gene name hypothetical protein LOC100245630
Homology with ArabidopsisSimilar to At4g26160: ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1) (HF=8e-9)
Module size 6 genes
NF 0.69
%ile 93.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.951620683_atCA811381hypothetical protein LOC100245630-8e-9At4g26160ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)O.I.H.G.S.X.
0.7189.50.931608259_atCF205412.1hypothetical protein LOC100255358-2e-6At5g59520ZIP2O.I.H.G.S.X.
0.6787.90.961622760_atCD719223hypothetical protein LOC100266427-1e+0At3g61920unknown proteinO.I.H.G.S.X.
0.6183.20.941619820_s_atCA811381hypothetical protein LOC100245630-8e-9At4g26160ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)O.I.H.G.S.X.
0.4057.70.951618607_s_atCB972339hypothetical protein LOC100255358-1e-3At1g55910ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)O.I.H.G.S.X.
0.4057.70.961617846_atCF210020hypothetical protein LOC100242395-2e-47At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.189.1GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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