Co-expression analysis

Gene ID 1620621_at
Gene name similar to nam-like protein
Homology with ArabidopsisSimilar to At1g01720: ATAF1 (HF=4e-33)
Module size 6 genes
NF 0.21
%ile 30.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.951620621_atCF519062similar to nam-like protein-4e-33At1g01720ATAF1O.I.H.G.S.X.
0.3650.70.951619178_atCB349106hypothetical protein LOC100257853 /// hypothetical protein LOC100252432-3e-8At1g68300universal stress protein (USP) family proteinO.I.H.G.S.X.
0.2530.50.951613026_atCF215169--2e-20At1g65000unknown proteinO.I.H.G.S.X.
0.1718.20.951607042_atCF209844hypothetical protein LOC100262420-2e-12At4g09830-O.I.H.G.S.X.
0.1414.40.951612913_atBQ792733similar to Citrate synthase, glyoxysomal-1e-46At3g58750CSY2 (citrate synthase 2)O.I.H.G.S.X. protein LOC100259485-1e-2At3g01170structural constituent of ribosomeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.194.6GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
3.194.6GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.094.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.793.0GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.692.5GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.591.9GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.390.7GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.390.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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