Co-expression analysis

Gene ID	1620593_at
Gene name	hypothetical protein LOC100252659
Homology with Arabidopsis	Similar to At1g30580: GTP binding (HF=1e-97)
Module size	6 genes
NF	0.55
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.99	1620593_at	BQ797219	hypothetical protein LOC100252659	-	1e-97	At1g30580	GTP binding	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1609434_at	CF211782	hypothetical protein LOC100240790	-	1e-41	At3g42050	vacuolar ATP synthase subunit H family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1613683_at	CB976586	hypothetical protein LOC100255739	-	7e-15	At1g47560	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1616039_at	CF215123	hypothetical protein LOC100248352	-	1e-20	At3g55440	TPI (TRIOSEPHOSPHATE ISOMERASE)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1619647_at	CB975254	similar to T5E21.11	-	5e-4	At1g27160	valyl-tRNA synthetase / valine--tRNA ligase-related	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1614631_at	CB979660	hypothetical protein LOC100254376	-	1e-137	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.3	95.2	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.9	93.8	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.6	92.5	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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