Co-expression analysis

Gene ID 1620580_at
Gene name
Homology with ArabidopsisSimilar to At5g20160: ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein (HF=4e+0)
Module size 6 genes
NF 0.08
%ile 15.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.841620580_atCB343401--4e+0At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinO.I.H.G.S.X.
0.4057.70.951610470_atCF202637.1--1e-7At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.H.G.S.X.
0.1313.30.941619188_atCF204375.1--2e+0At1g48940plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.088.50.931607040_atCF568797--5e-24At1g54610protein kinase family proteinO.I.H.G.S.X.
0.066.80.921622555_atCD010705--3e-11At3g17970atToc64-III (Arabidopsis thaliana translocon at the outer membrane of chloroplasts 64-III)O.I.H.G.S.X.
0.023.20.941606871_atCB970216hypothetical protein LOC100265666-1e-3At4g11090unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.898.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.798.5GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.698.4GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.598.4GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
5.298.2GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.497.3GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.397.2GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
4.297.1GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
4.096.7GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.096.7GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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