Co-expression analysis

Gene ID	1620578_at
Gene name
Homology with Arabidopsis	Similar to At1g01940: peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein (HF=3e-13)
Module size	6 genes
NF	0.07
%ile	14.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.95	1620578_at	CF372517	-	-	3e-13	At1g01940	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.97	1618962_at	BQ798116	hypothetical protein LOC100257791	-	7e-21	At1g34020	transporter-related	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.96	1614849_at	CB347656	hypothetical protein LOC100246442	-	6e+0	Atmg00060	-	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.95	1609365_at	CB003990	hypothetical protein LOC100259168	-	8e-5	At5g65860	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.97	1609299_at	CB917188	hypothetical protein LOC100248155	-	4e+0	At5g20550	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.98	1618248_at	CF514874	hypothetical protein LOC100250810	-	1e-19	At5g20180	ribosomal protein L36 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM436353	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436385	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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