Co-expression analysis

Gene ID 1620556_at
Gene name hypothetical protein LOC100261914
Homology with ArabidopsisSimilar to At5g63150: unknown protein (HF=4e+0)
Module size 18 genes
NF 0.50
%ile 75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6585.00.951620556_atCF208984hypothetical protein LOC100261914-4e+0At5g63150unknown proteinO.I.H.G.S.X.
0.7491.00.971614257_atCB339549hypothetical protein LOC100250970-4e-1At2g21660CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2)O.I.H.G.S.X.
0.6988.30.971607123_atCF204106.1--2e-9At1g11870SRS (SERYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.5475.70.971610900_atCF516848hypothetical LOC100244581-2e-1At1g78480prenyltransferase/squalene oxidase repeat-containing proteinO.I.H.G.S.X.
0.5475.70.971609523_atCF415830hypothetical protein LOC100250310-7e-2At2g28020-O.I.H.G.S.X.
0.5475.70.971614765_atCD003886hypothetical protein LOC100242287-1e-78At3g59870unknown proteinO.I.H.G.S.X.
0.5173.20.961610508_atBQ794347hypothetical protein LOC100253402-1e-9At3g44620protein tyrosine phosphataseO.I.H.G.S.X.
0.5072.70.971610065_atCF373155hypothetical protein LOC100260744-3e-1At4g09775-O.I.H.G.S.X.
0.4969.30.961613992_atCF204258.1hypothetical protein LOC100257648-1e-1At1g78340ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)O.I.H.G.S.X.
0.4969.30.961614298_atCF403239hypothetical protein LOC100256505-7e-40At1g08465YAB2 (YABBY2)O.I.H.G.S.X.
0.4868.80.971620148_atCF210107hypothetical protein LOC100252338-3e-17At3g58830haloacid dehalogenase (HAD) superfamily proteinO.I.H.G.S.X.
0.4767.70.961622017_atBQ106735hypothetical protein LOC100241648-4e-34At1g74910ADP-glucose pyrophosphorylase family proteinO.I.H.G.S.X.
0.4464.10.961619663_atCF212160hypothetical protein LOC100243552-4e+0At4g10920KELPO.I.H.G.S.X.
0.4260.10.961613390_atBQ794675hypothetical protein LOC100255619-5e-39At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)O.I.H.G.S.X.
0.4158.70.971612460_s_atCF207746hypothetical protein LOC100245544-4e-20At2g38270CXIP2 (CAX-INTERACTING PROTEIN 2)O.I.H.G.S.X.
0.3954.90.961620204_atBQ792129--8e-1At1g20070unknown proteinO.I.H.G.S.X.
0.3853.60.961616874_atCF415286--2e-18At5g58250unknown proteinO.I.H.G.S.X.
0.2937.70.961611293_atCF414363hypothetical protein LOC100267754-3e-19At2g43030ribosomal protein L3 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.7GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.784.7GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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