Co-expression analysis

Gene ID	1620541_at
Gene name	hypothetical protein LOC100257177
Homology with Arabidopsis	Similar to At3g53610: ATRAB8 (HF=5e-75)
Module size	6 genes
NF	0.56
%ile	82.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.7	0.96	1620541_at	CF212449	hypothetical protein LOC100257177	-	5e-75	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.96	1613101_at	CB983076	hypothetical protein LOC100253683	-	3e-69	At3g62120	tRNA synthetase class II (G, H, P and S) family protein	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.96	1609699_at	CD798152	hypothetical protein LOC100241045	-	1e-3	At5g64250	2-nitropropane dioxygenase family / NPD family	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.96	1617669_at	CF210717	hypothetical protein LOC100265782	-	2e-34	At4g35230	BSK1 (BR-SIGNALING KINASE 1)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1609567_at	CF604738	hypothetical protein LOC100241045	-	1e-3	At5g64250	2-nitropropane dioxygenase family / NPD family	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1612913_at	BQ792733	similar to Citrate synthase, glyoxysomal	-	1e-46	At3g58750	CSY2 (citrate synthase 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.2	94.9	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.1	94.6	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.9	93.8	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.4	91.3	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.4	91.3	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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