Co-expression analysis

Gene ID	1620509_at
Gene name	hypothetical protein LOC100248585
Homology with Arabidopsis	Similar to At4g39220: ATRER1A (HF=2e-21)
Module size	6 genes
NF	0.65
%ile	90.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1620509_at	CF213694	hypothetical protein LOC100248585	-	2e-21	At4g39220	ATRER1A	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1613718_s_at	CF202933.1	hypothetical protein LOC100241422	-	7e+0	At5g11120	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1614948_at	CF518835	hypothetical protein LOC100265775	-	6e-61	At4g35360	pantothenate kinase family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1611308_at	CF202925.1	hypothetical protein LOC100248182	-	6e-4	At3g47810	MAG1 (MAIGO 1)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1619577_at	CF213082	hypothetical protein LOC100266782	-	1e+0	At4g28950	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1622052_s_at	CF213694	hypothetical protein LOC100248585	-	2e-21	At4g39220	ATRER1A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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